Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPGDWSVFAWHAANLPTMPEAEDIGNEAAGGRFGVSIRSAGYLRKWFLLGITIGVIAGLGAVVFYLALKYTSEFLLGYLADYQIPTPVGEGGHRGSTGFARPWAIPLVTTGGAVLSA---LIVAKLAPEATGHGTDEAIESVHGDPRAIRGRAVLVKMVASALTIGSGGSGGREGPTAQISAGFCSLLTRRLNLSNEDGRTAVALGIGAGIGAIFAAPLGGAALGASIPYRDDFDYR--NLLPGFIASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLWFVVIGLIAAAVGYLYARVFHASVAITRRLPG-GPVLKPAIGGLLVGLLGLPIPQILSSGYGWAQLAADRGTLLSIPLWIVIVLPIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLGELTELPGVPHEPGIFVVVAMMACFGSVSRAPLAVMIMVAEMTGSFSVVPGAIIAVGIAALLLSRT-NVTIYETQRLNRQTAEAERGGSDRPTTA |
| 3ND0 Chain:A ((27-450)) | ------------------------------------------LHPRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLA-QI--------------LAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSGIPQIEGHLEGKLPLVWQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKATQENQRILIAVGAGAGLATAFNAPLAGVALIGEEMHPR-FRSQTLAYHSLLFGCVMATIILRMIRGQSAIISLTEFKRV--PLDSLWMFIILGILFGVMGYTFNRGLFKVLDWFDRLPPLATKWKGFLLGSIIGILSLFPLPLTDGGDNAVLWAFNSQSH----FSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMARHFHLL-FPSQIPEPAVMAIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEALGGKPIYTVLLERTLAKQNR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ND0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343172 for 4047 contacts (-84.8/contact) +
2D Compatibility (PS) -42841 + (NN) -10618 + (LL) 2172
1D Compatibility (HY) -24000 + (ID) 4500
Total energy: -422959.0 ( -104.51 by residue)
QMean score : 0.349
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