Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFPRTLAILAAAAALVVACSHGGTPTGSSTTSGASPATPVAVPVPRSCAEPAGIPALLSPRDKLAQLLVVGVRDAA-DAQAVVTNYHVGGILIGSDTDLTIFD--GALAEIVAGGGPLPLAVSVDEEGGRVSRLRSLIGGTGPSARELAQTRTVQQVRDLARDRGRQMRKLGITIDFAPVVDVTDAPDDTVIGDRSFGSDPATVTAYAGAYAQGLRDAGVLPVLKHFPGHGRGSGDSHNGGVTTPPLDDLVGDDLVPYRTLVTQAPVGVMVGHLQVPGL-TGSEPASLSKAAVNLLRTGTGYGAPPFDGPVFSDDLSGMAAISDRFGVSEAVLRTLQAGADIALWVTTKEVPAVLDRLEQALRAGELPMSAVDRSVVRVATMKGPNPGCGR |
| 5IOB Chain:F ((11-346)) | ------------------------------------PPAPTAEDLAR-----AQIPE--QQRDQVASLVGVANYDQALDA----LNQGVGGIFIGSWTDENLLTEPGRNIEALREAVGRDFSVSIDFEGGRVQRATNILGDF-PSPR-VAQT-TPEQVEDLAEILGTGLAAHGVTVNFAPVVDV-DAWGL-------FSNDPAVAATYATAFAKGLSKVGITPVFKHFPGHG------------TPALDELKTYDLIPYGQALSETD-GAVVGHI-VPGLGTDGVPSSIDPATYQLLRSGDYPGGVPFDGVIYTDDLSG-------HSPAEAVLASLKAGADQALWIDYGSLGSAIDRVDAAVSSGEYPQEQL-ASALRVQLL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5IOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165182 for 2526 contacts (-65.4/contact) +
2D Compatibility (PS) -32556 + (NN) -17781 + (LL) 3360
1D Compatibility (HY) -18800 + (ID) 6900
Total energy: -237859.0 ( -94.16 by residue)
QMean score : 0.473
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