Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLVTMTTRVPDSMPADAVERVRAREAARSRELAAQGKLLRLWRPPLRPGEWRTLGLFAADDNGELEQLLASMPPRSWRTDDVTPLGAHPNDPVGQGITIAPGKGPEFLIATTIMVPPGTPAQVVDDTVAREARRAPELAGRGHLVRLWALPDGPDGQRTLGLWRARDPGELMAILESLPLAGWMTIETTPLSPHPDDPIRMP
3ZNU Chain:G ((1-88))
MLYLVRMTVNLPRNLDPREEERLKASEKARSRTLQEQGQWRYLWRT---TGKYGNISVFDVNSHDELHEILWSLPFFPYLTIDVEPLSHHP-----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZNU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16193 for 543 contacts (-29.8/contact) +
2D Compatibility (PS) -9977 + (NN) -10134 + (LL) 5300
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -41104.0 ( -75.70 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3ZNU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZNU-query.scw
PDB file :
Tito_Scwrl_3ZNU.pdb
: