Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVNDGVDQMGAEPDIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPERQSSEELATALAASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALGDAPPQRSRRLREMRDLLAYMENVVSDALGRYSQRTGEDD
4AIK Chain:A ((16-100))
------------------WRALIDHRLKPLELTQTHWVTLYNINRLPPE-QSQIQLAKAIGIEQPSLVRTLDQLEEKGLITRHTSANDRRAKRIKLTEQSSPII-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4AIK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48988 for 525 contacts (-93.3/contact) +
2D Compatibility (PS) -8750 + (NN) -1612 + (LL) 5336
1D Compatibility (HY) 1200 + (ID) 900
Total energy: -53714.0 ( -102.31 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_4AIK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AIK-query.scw
PDB file :
Tito_Scwrl_4AIK.pdb
: