Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQTTQSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFGNQE
2Z77 Chain:C ((5-137))
----TQSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFGN--
General information:
TITO was launched using:
RESULT:
Template:
2Z77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63924 for 993 contacts (-64.4/contact) +
2D Compatibility (PS) -14330 + (NN) -5444 + (LL) 656
1D Compatibility (HY) -17600 + (ID) 6650
Total energy: -107292.0 ( -108.05 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_2Z77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z77-query.scw
PDB file :
Tito_Scwrl_2Z77.pdb
: