Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTM-----HMT--TFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSG-TADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 4BFA Chain:A ((22-335)) | -------------------ASMRVLLAPMEGVLDSLVRELLTEVND------YDLCITEFVRVVDQLLPV-KVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELG-SWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVP-AHLPVSVKVRLGWDSG-EKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRL-NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNE------PRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDI----------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184888 for 2665 contacts (-69.4/contact) +
2D Compatibility (PS) -33015 + (NN) -10803 + (LL) 1652
1D Compatibility (HY) -18800 + (ID) 3800
Total energy: -249654.0 ( -93.68 by residue)
QMean score : 0.532
|
|
|