Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGRCPTVAVVGAGMSGMCVAITLLSAGITDVCIYEKADDVGGTWRDNTYPGLTCDVPSRLYQYSFAKNP----NWTQMFSRGGEIQDYLRGIAERYGLRHRIRFGATVVSARFDD--GRWVLRTDSGTESTVDFLISATGVLHHPRIPPIAGLDDFRGTVFHSARWDHT-VPLLGRRIAVIGTGSTGVQLVCGLAGVAGKVTMFQRTAQWVLPWPN------------PRYSKLARVFHRAFPCLGSLAYK----AYSLSFETFAVALS------NPGL---HRKL---------VGAVCRASLRR-VRDPRLRRALTPDYEPM-CKRLVMSGGFYRAIQRDDVELV---TAGIDHVEHRGIVTDDGVLHEVDVIVLATGFD--SHAFFRPMQLTGRDGIRIDDVWQDGPHAHQTVAIPGFPNFFMMLGPHSPVGNFPLTAVAESQAE----HIVQWIKRWRHGEFDTMEPKSAATEAYNTVLRAAM-PNTV-WTTGCDSWYLNKDGIPEVWPFAPAKHRAMLANLHPEEYDLRRYAAVRATSRPQSA |
| 4D04 Chain:A ((19-506)) | -------VLVVGAGFSGLYALYRLRELGRS-VHVIETAGDVGGVWYWNRYPGARDDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEF-REESRNTPG-GTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSERE-YELDSLVLATGFDALTGALFK-IDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNGLTRSEAVLEKEDEWVEHVNEIADETLYPMTASWYTGAN------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -329037 for 3519 contacts (-93.5/contact) +
2D Compatibility (PS) -47021 + (NN) -21888 + (LL) 3740
1D Compatibility (HY) -28000 + (ID) 7750
Total energy: -429956.0 ( -122.18 by residue)
QMean score : 0.488
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