Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGVTRQKILITGASSGLGAGMARSF--AAQGR-DLALCARRTDRLTELKAELSQRYPDIKIAVAELDVNDHERVPKVFAELSDEIGGIDRVIVNAGIGKGA-RLGSGKLWANKATIETNLVAALVQIETALDMFNQRGSGHLVLISSVLGVKGVPGVKAAYAASKAGVRSLGESLRAEYAQRPIRVTVLEPGYIESEMTAKSASTMLMVDNATGVKALVAAIEREPGRAAVPWWPWAPLVRLMWVLPPRLTRRFA
3RKU Chain:B ((33-226))
------KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYP-TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFS--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RKU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101889 for 1486 contacts (-68.6/contact) +
2D Compatibility (PS) -20530 + (NN) -8178 + (LL) 5264
1D Compatibility (HY) -13200 + (ID) 3250
Total energy: -141783.0 ( -95.41 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_3RKU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RKU-query.scw
PDB file :
Tito_Scwrl_3RKU.pdb
: