Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWRYPLSTRLALPNTPGVASFAMTSSPSTVSTTLLSILRDDLNI--DLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEEL--LTCDTVGELEAAIAAKYRDE
5CZD Chain:B ((4-80))
MW----------------------------DAQFENLLRRYLPFLSADQPLEQDINL-RDIGLDSLGTVELLSELENTYDVHFQDEALTKETFETPGVLWKTLSQM----
General information:
TITO was launched using:
RESULT:
Template:
5CZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40986 for 447 contacts (-91.7/contact) +
2D Compatibility (PS) -7591 + (NN) -1706 + (LL) 1644
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -55239.0 ( -123.58 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_5CZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5CZD-query.scw
PDB file :
Tito_Scwrl_5CZD.pdb
: