Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGNTIHVPCQPCRHGHGAPSRGLRGRPADRWPVARATPTLHVCPQNQGVGLDFVRKPEYGRLRWPAYPAGTNNDRLISMRDGGIVALPQLTDEQRAAALEKAAAARRARAELKDRLKRGGTNLTQVLKDAESDEVLGKMKVSALLEALPKVGKVKAQEIMTELEIA---------PTRRLRGLGDRQRKALLEKFGSA |
2A1J Chain:B ((30-85)) | ---------------------------------------------------------------------------------------------------------------------------------------------VTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9209 for 292 contacts (-31.5/contact) +
2D Compatibility (PS) -5089 + (NN) -1124 + (LL) 7588
1D Compatibility (HY) -4400 + (ID) 500
Total energy: -12734.0 ( -43.61 by residue)
QMean score : 0.486
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