Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
1UZM Chain:B ((9-245))
--------AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA------MTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS-------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDT-------------ALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGM--
General information:
TITO was launched using:
RESULT:
Template:
1UZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128027 for 1827 contacts (-70.1/contact) +
2D Compatibility (PS) -23371 + (NN) -12523 + (LL) 1880
1D Compatibility (HY) -26000 + (ID) 10450
Total energy: -198491.0 ( -108.64 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_1UZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UZM-query.scw
PDB file :
Tito_Scwrl_1UZM.pdb
: