Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLG----FTSGGVRLTRTKTRPYLGDLGAAVA-----PRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGH-DLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
| 3ECA Chain:C ((81-310)) | --------------------------------------------------------------------------------------DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKTGT---AVVRSSRVP---TGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLAL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ECA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160873 for 1809 contacts (-88.9/contact) +
2D Compatibility (PS) -24717 + (NN) -18539 + (LL) 5332
1D Compatibility (HY) -11200 + (ID) 4150
Total energy: -214147.0 ( -118.38 by residue)
QMean score : 0.476
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