Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLLSRLRKREPISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTSGESTTAPV
1RTE Chain:B ((2-129))
-GLLSRLRKREPISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTSG-------
General information:
TITO was launched using:
RESULT:
Template:
1RTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95563 for 870 contacts (-109.8/contact) +
2D Compatibility (PS) -13974 + (NN) -7882 + (LL) 584
1D Compatibility (HY) -17600 + (ID) 6400
Total energy: -140835.0 ( -161.88 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_1RTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RTE-query.scw
PDB file :
Tito_Scwrl_1RTE.pdb
: