Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALAAVRD
4AXK Chain:B ((2-242))
--TFTILPAVDVVNGQAVRLDQGEAGTEKSYGTPLESALRWQEQGAEWLHFVDLDAAFNRGSNHELMAEITRQLDIKVELTGGIRDDASLERALATGATRVNIGTAALEKPEWIADVIRRHGEKIAVDIAVRLENGEWRT----------DLWEVLERLDSQGCSRFVVTDVSKDGTLTGPNVDLLRDVAAATDAPIVASGGISTLEDVLGLAKYQDEGIDSVIIGKALYEHRFTLAEALEAV--
General information:
TITO was launched using:
RESULT:
Template:
4AXK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178817 for 1904 contacts (-93.9/contact) +
2D Compatibility (PS) -25688 + (NN) -11876 + (LL) 188
1D Compatibility (HY) -26000 + (ID) 7100
Total energy: -249293.0 ( -130.93 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_4AXK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AXK-query.scw
PDB file :
Tito_Scwrl_4AXK.pdb
: