Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MDQQSTRTDITVNVDGFWMLQALLDIR--HVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVVNDAV--NEQVAARMKVLAAP-----DLEVVALLSRGKLLYGVIDDENQPPGSRD---IPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVSDSASIAALVMDG----LESIHHADPAAINAVNVP-------------------------MEEMLEATKSWQESGFNVFSG-GDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAG-------SGEAWLAICPAT-PQLVQVGVKTV---------LDTLPYGEWKTHSRV--------------------------------------- |
| 4WZI Chain:A ((85-576)) | VTPFAQVLASLRSVRNNFTIQKLAMETLEELDWALDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRCGNQVSEYISNTFLDKENEDHLAKELEDLNKWGLNIFNVAGYSHNRPLTAIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHADIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDN-YTDRIQVLRNMVHAADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMADKHTACVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQAMIP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26891 for 1953 contacts (-13.8/contact) +
2D Compatibility (PS) -31685 + (NN) -5820 + (LL) -172
1D Compatibility (HY) -4000 + (ID) 2500
Total energy: -71068.0 ( -36.39 by residue)
QMean score : 0.135
|
|
|