Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT
3QB9 Chain:D ((3-161))
MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT
General information:
TITO was launched using:
RESULT:
Template:
3QB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20953 for 1187 contacts (-17.7/contact) +
2D Compatibility (PS) -17649 + (NN) -14332 + (LL) 0
1D Compatibility (HY) -22000 + (ID) 7950
Total energy: -82884.0 ( -69.83 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3QB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QB9-query.scw
PDB file :
Tito_Scwrl_3QB9.pdb
: