Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG----ARWLSLEGRAAVNSDIDAVRDAELRYAQRYRTPRPNPRRVVIEVQIERVLGSADLLDRA
3FKH Chain:A ((8-130))
-------ILNEQEALERLQSVSLGRVVVRR-SDEMDIFPVNFIVDKG--AIYIRTA-E--------LNHDVLFEADEVKDGKAWSVVVRATAEIVRKLDEIAYADTLELKPWIP---TLKYNYVRIVPNEITGREFT----
General information:
TITO was launched using:
RESULT:
Template:
3FKH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46397 for 747 contacts (-62.1/contact) +
2D Compatibility (PS) -12241 + (NN) -5110 + (LL) 1488
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -65760.0 ( -88.03 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_3FKH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FKH-query.scw
PDB file :
Tito_Scwrl_3FKH.pdb
: