Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQSLAVKTFEDLFAELGDRARTRPADSTTVAALDGGVHALGKKLLEEAGEVWLAAEHESNDALAEEISQLLYWTQVLMISRGLSLDDVYRKL
1VMG Chain:A ((25-91))
------------------------KEMYFEKD-SQRGIYATFTWLVEEVGELAEALLSNNLDSIQEELADVIAWTVSIANLEGIDIEEALKK-
General information:
TITO was launched using:
RESULT:
Template:
1VMG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6897 for 390 contacts (-17.7/contact) +
2D Compatibility (PS) -7621 + (NN) -7545 + (LL) 2508
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -21505.0 ( -55.14 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1VMG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VMG-query.scw
PDB file :
Tito_Scwrl_1VMG.pdb
: