Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQAGRGGLRARVLR-RWSVPPVRPPVTVVQALP-KSERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATE-RIVDI-----AA-AQAGSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWDASASDCEYCDVTRR |
| 3KW2 Chain:A ((6-248)) | ---PLFYAPD---IEQSDRLPDDEAGHILRVLRMQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKPWRDRITIAIAPTKQSERMEWMLEKLVEIGVDEVVFIESEHSERRR------IKAERLERIAISAMKQSLKASFPVIRVNIPIQTVIADTPK----AAVRLIAYVDEAVR----GRGYPSDFYHVGQDVLILIGPEGDFSPSEVESALLAGFAPVSLGESRLRTETAGLVACQWIHTLQACYRI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143400 for 1774 contacts (-80.8/contact) +
2D Compatibility (PS) -24225 + (NN) -3783 + (LL) 2308
1D Compatibility (HY) -7200 + (ID) 2950
Total energy: -179250.0 ( -101.04 by residue)
QMean score : 0.369
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