Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAV-P-EPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVADG-KPADLVNFSVEPDIARLVKAGKVDK-D------WDA----D------ATKGIPFG-SVVTFVVRAGNPK---NIRDWDDLLRPG-I--EVITPSPLSSGSAKWNLLAPYAAKSD--GGRNNQAGIDFVNTLVNEHVKLRPGSGREATDVFVQGSGDVLISYENEAIATERAGKPVQHVTPPQTFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 3RPW Chain:A ((31-312)) | -----------------------------------------------------QSNVVIMQDPGGGYGDALRKVMYDPFEKET-GIKVVTVQEARSGPRIKAQAEAGKAQWDLTFIFD-QET-KLLGDCCLADIDYSKLSESAHKTLAAMPDNLKRKKGVALQVIGVGLVYNKDKFKGDKAPQTWADFWDVKKFPGRRCMPAWPRF--TFEAALMADGVTKDKLYPIDMDRALKKLKEI-KPHVVKWWTTAAQPPQLILDGEADMCLAYTGSMSKLALEGAPIDLTFNQG-FVYYDFFSIPKGAPNYDNALKLLSWRLDPKRAAQLTSTFPVALPSKVVFDA-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50315 for 2011 contacts (-25.0/contact) +
2D Compatibility (PS) -27606 + (NN) -11354 + (LL) 5540
1D Compatibility (HY) -8400 + (ID) 1400
Total energy: -93535.0 ( -46.51 by residue)
QMean score : 0.344
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