Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPS-GTAIIVVDASAENTVLVAPGANAHLTPV-----PSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEA---------NDWPSPP----TH------FVITLGVRGARYVGADGVFE-VPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS |
| 1RK2 Chain:D ((7-261)) | ---------------LVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPA---RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGV-WASVNGEGQRVPGFRVQAVDTIAAGDTFNGAL-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109068 for 1834 contacts (-59.5/contact) +
2D Compatibility (PS) -26218 + (NN) -12571 + (LL) 3736
1D Compatibility (HY) -10800 + (ID) 4550
Total energy: -159471.0 ( -86.95 by residue)
QMean score : 0.491
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