Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSQNSQIQPQARYILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLSAQTA
4U0G Chain:S ((3-198))
--------------ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRDKILTAEEAKDYGIIDTVLEYRKLS----
General information:
TITO was launched using:
RESULT:
Template:
4U0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116690 for 1429 contacts (-81.7/contact) +
2D Compatibility (PS) -21791 + (NN) -12831 + (LL) 1332
1D Compatibility (HY) -27200 + (ID) 9800
Total energy: -186980.0 ( -130.85 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_4U0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U0G-query.scw
PDB file :
Tito_Scwrl_4U0G.pdb
: