Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGEDSIRSFPVPDLGEGLQEVTVTCWSVAVGDDVEINQTLCSVETAKAEVEIPSPYAGRIVELGGAEGDVLKVGAELVRIDTGPTAVAQPNGEGAVPTLVGYGADTAIETSRRTSRPLAAPVVRKLAKELAVDLAALQRGSGAGGVITRADVLAAARGGVGAGPDVRPVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVSAAP----EITPFALTLRLLVIALKHNVILNSTWVDSGEGPQVHVHRGVH-LGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGALGVDDGVPVINHPEAAILGLGAIKPRP-VVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETALLDL |
2II5 Chain:H ((35-261)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVKGFHKAMVKTMSAALK-IPHFGYCDEVDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNAS-VD--ENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2II5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124480 for 1696 contacts (-73.4/contact) +
2D Compatibility (PS) -25157 + (NN) -14968 + (LL) 9508
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -172647.0 ( -101.80 by residue)
QMean score : 0.495
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