Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
1SMC Chain:C ((22-150))
-STTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSF------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SMC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87391 for 863 contacts (-101.3/contact) +
2D Compatibility (PS) -14147 + (NN) -5449 + (LL) -160
1D Compatibility (HY) -18800 + (ID) 6450
Total energy: -132397.0 ( -153.41 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1SMC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SMC-query.scw
PDB file :
Tito_Scwrl_1SMC.pdb
: