Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASRTMVSSGSEFESAVG-YSRAVRIGPLVVVAGT------TGS--GDDIAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGSAVADRNSGAGPKDPSPAGG
2B33 Chain:B ((24-135))
---------------KAIGPYSQAVVVGNMMFVSGQIPIDPETGELVQGTIEEKTERVLENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFGDHRPARSFVAV-AQLPRNVEIEIEAIA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2B33.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63341 for 698 contacts (-90.7/contact) +
2D Compatibility (PS) -11570 + (NN) -3834 + (LL) 604
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -89191.0 ( -127.78 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_2B33.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B33-query.scw
PDB file :
Tito_Scwrl_2B33.pdb
: