Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSADDFAREIEALRAHRNLSAHS |
| 4C2M Chain:I ((85-123)) | -KCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRT------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54 for 199 contacts (-0.3/contact) +
2D Compatibility (PS) -4014 + (NN) -4363 + (LL) 8668
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -1363.0 ( -6.85 by residue)
QMean score : 0.639
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