Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLDGCGKRVEVSFAAPATLPESLRSLPGCHLLVR----P---EVMRRDVDLVVTVDIPSVDRLGALGDLT-DSGRELLVIDHHASNDLFGTANFIDPSADSTTTMVAEILDAWG--KPIDPRVAHCIYAGLATDTGSFRWA--SVRGYRLAARLVEIGVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVGGRGLVYVVVDNREWV--AARSEEVESIVDIVRTTQQAEVAAVFKEVE-PHRWSVSMRAKT-VNLAAVAS-GFGGGGHRLAAGYTTTGSIDDAVASLRAALG |
| 4PY9 Chain:A ((3-333)) | --------------TKVIAQAHIDHFTKWFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIVPN--AFPDFLKWMPGSKDILLYDRYQEFADKLIMEADVICCLDFNALKRIDEMSDIVAASPGRKIMIDHHLYPEDFCRITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGIDKDDIYRKVYNTYSESRLRLMGYVLSNMKVYKDY----NSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE--MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYGTMEEAVKVFEQA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230136 for 2619 contacts (-87.9/contact) +
2D Compatibility (PS) -33777 + (NN) -13838 + (LL) 556
1D Compatibility (HY) -21200 + (ID) 3750
Total energy: -302145.0 ( -115.37 by residue)
QMean score : 0.433
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