Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPSRTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPWVQ--------TPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTCL
4U6J Chain:A ((13-292))-----------LMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILT--


General information:
TITO was launched using:
RESULT:

Template: 4U6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143542 for 2405 contacts (-59.7/contact) +
2D Compatibility (PS) -29934 + (NN) -17534 + (LL) 596
1D Compatibility (HY) -19600 + (ID) 6850
Total energy: -216864.0 ( -90.17 by residue)
QMean score : 0.519

(partial model without unconserved sides chains):
PDB file : Tito_4U6J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U6J-query.scw
PDB file : Tito_Scwrl_4U6J.pdb: