Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALIAL-GGWLLLGRGLTALTPRSLG----VRWAPTV--RLGSMYGYGISYAVASLS------CTIGPFLAVTGAG-------LRGGSVVGSVAIYLA--------------------YVAGLTLVVG-VLAVAAATASSALADRLRRILP------------FVNRISGALLVVVGLYVGYYGLY--ELRLIAGVGANPQDAVIAAAGRLQGALAGWVNQHG-------------AWPWAVLL------VVLVV---GAFAGTWFRRVRR |
3FHC Chain:A ((9-405)) | IPEREMKDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLI----QNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS---EYGSIIAFFDVRTFSNEAQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG-SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNAPVLMLLSTDGVLCPFYMIN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281115 for 2080 contacts (-135.2/contact) +
2D Compatibility (PS) -28510 + (NN) 10067 + (LL) 1196
1D Compatibility (HY) -18000 + (ID) 3050
Total energy: -319412.0 ( -153.56 by residue)
QMean score : 0.043
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