Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
1EH1 Chain:A ((3-185))
-LKELYAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQEILG-
General information:
TITO was launched using:
RESULT:
Template:
1EH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44570 for 1292 contacts (-34.5/contact) +
2D Compatibility (PS) -20400 + (NN) -11952 + (LL) 400
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -94572.0 ( -73.20 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_1EH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EH1-query.scw
PDB file :
Tito_Scwrl_1EH1.pdb
: