Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQL-VSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPE------------------------DHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS-D-------GRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRF-GIPDGLY-AEPVAVKQGW-MCCIGSSWMHLSTGVIG-PERR-YIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 5AQB Chain:A ((180-406)) | ----------------------------------------------------------------------------------------LGARVGYIELDLNSGKILESFRSEERFPMMSTFKVLLAGAILSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELASAAITMSDNTAANLLLTTIGGPKGLTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPVAMATTLRKLLTG-ELLTPASRQQLMDWMEAD------KV--AGPLLRSVLPAGWFIADKSGAGERG-----SRGIVAALGPDGKPSRIVVIYTTGS----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93725 for 1541 contacts (-60.8/contact) +
2D Compatibility (PS) -21118 + (NN) -11911 + (LL) 8656
1D Compatibility (HY) -1600 + (ID) 1650
Total energy: -121348.0 ( -78.75 by residue)
QMean score : 0.483
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