Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADSLA-------ERLRSAAADEPAV----ECGGDDNLFIMYTSGTTGHPKGVVHTHESV--HSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAMRGVT-LISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAAKNIEVVQGYALTESC---------GGGTLLLSEDALRKAGSAGRATMFTDVAVRGDDGV-IREHGE--GEVVIKSDILLKEYWNRPEATRDAFD-NGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSEVAVIGLPDEKWGEIAAAIVVADQNEVSEQQIVEY-CGTRLARYKLPKKVIFAEAIPRNPTGKILKTVLREQYSATVPK |
| 1V25 Chain:B ((47-535)) | ----------------------------RTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELK---TVQHFVVMDEKAPEGYLAYEEALGEEADPVRVPERAACG------MAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARFERMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVADEEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVDLENALMGH-----AAVVAIPHPKWQERPLAV-------------NEHLLKAGFAKWQLPDAYVF---------GKFLKRALREQYK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294629 for 3565 contacts (-82.6/contact) +
2D Compatibility (PS) -45848 + (NN) -8914 + (LL) 3648
1D Compatibility (HY) -27200 + (ID) 7600
Total energy: -380543.0 ( -106.74 by residue)
QMean score : 0.388
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