Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVVAEGAYPYCRLTDQPLSVDEVLAAVSGPEQGGIVIFVGNVRDHNAGHDVTRLFYEAYPPMVIRTLMSIIGRCEDKAEGVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQEVPIWKKEFSSTGAEWVGDRP
2QIE Chain:H ((9-136))
-----------------EPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEI-----KWQGH--
General information:
TITO was launched using:
RESULT:
Template:
2QIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87329 for 860 contacts (-101.5/contact) +
2D Compatibility (PS) -13626 + (NN) -10600 + (LL) 1156
1D Compatibility (HY) -5600 + (ID) 2400
Total energy: -118399.0 ( -137.67 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_2QIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIE-query.scw
PDB file :
Tito_Scwrl_2QIE.pdb
: