Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGV-VPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTG-VELGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 4R78 Chain:A ((21-279)) | ----------------------MEKIIKEKISSLLSQE-EEVLSVE--QL-GGMTNQNYLAKTT--------NKQYIVKFFGKGTE----KLINRQDEKYNLELLKD-LGL-DVKNYLFDI-----EAGIKVNEYIESAITLDST----------------SIKTKFDKIAPILQTIHTSAKELRG--EFA-------P-FEEIKKYESLIEEQIP-YANYESVRNAVFSLEKRLADL--GVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEF-----------TSQEE---ETFLSHYESDQTPVSHEKIAIYKILQDTIWSLWTVYKE--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157769 for 1975 contacts (-79.9/contact) +
2D Compatibility (PS) -27036 + (NN) -5735 + (LL) 7092
1D Compatibility (HY) -12000 + (ID) 1450
Total energy: -196898.0 ( -99.70 by residue)
QMean score : 0.286
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