Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLG----LRVDGVGSELTVSGRIEPGPGA-RVDCGLAGTVLRFVPPLAA---LGSVPVTFDGDQQARGRPIAPLLDALRELGVAV---DGTGLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGPVAAR--RWDIEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVIHADSSLEV-RGPTGYDGFDVDLRAVGELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVIT-ATPLRPGIWRAYADHRMAMAGAIIGLRVAGVEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG |
| 1MI4 Chain:A ((12-416)) | ------------VDGTINLPGSKSVSNRA----LLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAATAMR---PLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYP-PLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGD-LVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGE--LNAIDMDMNHIPDAAMTIAT-AALFAKGTTT-LRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDY----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MI4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208407 for 3607 contacts (-57.8/contact) +
2D Compatibility (PS) -42346 + (NN) -21541 + (LL) 1828
1D Compatibility (HY) -26000 + (ID) 6750
Total energy: -303216.0 ( -84.06 by residue)
QMean score : 0.451
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