Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESD-EDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDF--INPDDQTVVYCRIGERSSHTWFVLTH-LLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV |
| 3AAY Chain:A ((4-275)) | ----------------CDVLVSADWAESNLHAPKVVFVEVDED-TSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTAS-PPDNTIRAFRDEVLAAINVKNLIDVRSPDEFSGKILA-----QEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVL-RELLGHQNVKNYDGSWTEYGSLVGAPIEL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137724 for 2170 contacts (-63.5/contact) +
2D Compatibility (PS) -28350 + (NN) -13213 + (LL) 880
1D Compatibility (HY) -21600 + (ID) 6500
Total energy: -206507.0 ( -95.16 by residue)
QMean score : 0.458
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