Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MFTGIASHAGALGAALVVLIGAAILHDGPAAADPNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLD-GGMPVNDIVDGLRNDAYNIDPVMRLYPVRLTTTMTRFISAA-------VEIYCPNHHSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSP-------GWREPTGAMLASVLGAVRAGDPLI------PNPPPIPVPPPAAQTLIPPPPIVAPPPPRPAPPQQP-PPPPPEVEPPAGVPQSGGAAGSGGAGSGGGGGGDGPVEPSPARPMPPGFIRLAP- |
| 1TJY Chain:A ((1-316)) | GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNLAIVGFSTPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23381 for 2326 contacts (-10.1/contact) +
2D Compatibility (PS) -29362 + (NN) -6300 + (LL) 0
1D Compatibility (HY) 8400 + (ID) 1100
Total energy: -51743.0 ( -22.25 by residue)
QMean score : 0.087
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