Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MTVRAVLRRTVGAQWPILAGVNFWRRGALLIGIGVG-------VAAVLRLVLSE-ERAGLLVVRSKGIDFVTTVTVAAAMVYIAS-------TIDPLGTG-
2GRG Chain:A ((1-98))
MKSSIPITEVLPRAV-------GSLTFDENYNLLDTSGVAKVIEKSPIAEIIRKSNAELGRLGYSVYEDAQYIGHAFKKAGHFIVYFTPKNKNREGVVPPVGITN
General information:
TITO was launched using:
RESULT:
Template:
2GRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76973 for 532 contacts (-144.7/contact) +
2D Compatibility (PS) -8507 + (NN) -2890 + (LL) 488
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -93632.0 ( -176.00 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_2GRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GRG-query.scw
PDB file :
Tito_Scwrl_2GRG.pdb
: