Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT
2KNG Chain:A ((72-112))
-----------------------------------------------------------------------RGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT
General information:
TITO was launched using:
RESULT:
Template:
2KNG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11549 for 215 contacts (-53.7/contact) +
2D Compatibility (PS) -4528 + (NN) -2875 + (LL) 3088
1D Compatibility (HY) -3200 + (ID) 2050
Total energy: -21114.0 ( -98.20 by residue)
QMean score : 0.888
(partial model without unconserved sides chains):
PDB file :
Tito_2KNG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KNG-query.scw
PDB file :
Tito_Scwrl_2KNG.pdb
: