Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPALVVGPAAWHAVHVTQSSSAITPGQTAELYPGDIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ
4RHY Chain:B ((16-200))
------------------------------ELYPGDIKSVLLTAEQIQARIAELGEQIGNDYR------GQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYG------GVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY-
General information:
TITO was launched using:
RESULT:
Template:
4RHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157417 for 1336 contacts (-117.8/contact) +
2D Compatibility (PS) -18964 + (NN) -8522 + (LL) 2596
1D Compatibility (HY) -28400 + (ID) 8650
Total energy: -219357.0 ( -164.19 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_4RHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHY-query.scw
PDB file :
Tito_Scwrl_4RHY.pdb
: