Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKGRSALLRALWIAALSFGLGGVAVAAEPTAKAAPYENLMVPSPSMGRDIPVAFLAGGPHAVYLLDAF--NAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAM-------GNSRMFYNQYRSV-GGHNGHFDFPASGDNGWGSWAPQLGAMSGDIVGAIR
1R88 Chain:A ((33-299))--------------------------------AAPYENLMVPSPSMGRDIPVAFLAGGPHAVYLLDAFNAGP--DVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASD-------PAAMIGQAAEAMGNSRMFYNQYRSVGG-HNGHFDFPASGDNGWGSWAPQLGAMSGDIVGAIR


General information:
TITO was launched using:
RESULT:

Template: 1R88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -146049 for 2358 contacts (-61.9/contact) +
2D Compatibility (PS) -27568 + (NN) -12272 + (LL) 2740
1D Compatibility (HY) -30400 + (ID) 12550
Total energy: -226099.0 ( -95.89 by residue)
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_1R88.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R88-query.scw
PDB file : Tito_Scwrl_1R88.pdb: