Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLFGKRKSRATRRAEARAIKARAKLEAKLSAKNEARRIKAAQRAESKALKAQLKARRDSDRAALKVAEAELKVAREGKLLSPTRIRRLLTVSRLLAPILTPVIYRAAMAARGLIDQRRADQLGVPLAQIGRFSGHGARLSARVGGAERSLRMVQEKKPKDVETKQFVSAVTNRLTDLSAAVAAAEHMPAKRRRTAHSAISSQLDGIEADLMARLGLT |
| 4D2H Chain:A ((1-37)) | -----------------------------------------GSMSDFKDLWTKLKECHDREVQGLQVKVTKLKQERIL-------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4D2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 7429 for 139 contacts (53.4/contact) +
2D Compatibility (PS) -4490 + (NN) -6156 + (LL) 15152
1D Compatibility (HY) -1600 + (ID) 500
Total energy: 9835.0 ( 70.76 by residue)
QMean score : 0.729
|
|
|