Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
3O6T Chain:B ((9-118))
------SATIKVTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
General information:
TITO was launched using:
RESULT:
Template:
3O6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73904 for 837 contacts (-88.3/contact) +
2D Compatibility (PS) -12151 + (NN) -5828 + (LL) 324
1D Compatibility (HY) -14800 + (ID) 5450
Total energy: -111809.0 ( -133.58 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3O6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O6T-query.scw
PDB file :
Tito_Scwrl_3O6T.pdb
: