Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQ------------AGEILGQAAFDVDDFKDTRLGGWWVGYEHA-------PLWGAASGIVNYTSYWHFLNLARDGDSHG-------NPHGGYDYRYHKVD------GGIADVDWY----AMVYLYNRELKREDFDTTEAHY------------RQGTRSDWQEHYGD-------FQTAAFQPIDNLATYWFEQF----------------------RAAPSLQTIGYALHATGDVAQ---------PHHVWITSANGHSSWEGWVDDHYASEKLNDPAAVANL-----------VGRYDPSKSIRDLLTQT-GQVAYA-----RPEPLYDTSYETRLRVA-----KELIPESIALTVTVLTKGANSFDAPTAL------- |
| 3HJH Chain:A ((5-450)) | YRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGP--------VVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105692 for 2012 contacts (-52.5/contact) +
2D Compatibility (PS) -32866 + (NN) 1423 + (LL) 464
1D Compatibility (HY) -6400 + (ID) 2600
Total energy: -145671.0 ( -72.40 by residue)
QMean score : 0.137
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