Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLARDGFG--PAERQ-GVRTLVRD----KLVRHRYLHQIGLYSDFHHES-----------DALRE-LAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL |
| 3RGC Chain:A ((21-270)) | ---------------------------------------------------------------------------------------------------------------------------------------------NAIAVVVDKEPITTYDIDQTMKALK-----------------------------------IDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKS---SYEQFRTNFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTKK------TILK----------PQNA---SLNTSNADPRL-LGLLSQIPVGSFSPVLNGKNGYELYEVKSKDGTQT-PEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4038 for 1470 contacts (2.7/contact) +
2D Compatibility (PS) -24549 + (NN) -9919 + (LL) 13144
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -22986.0 ( -15.64 by residue)
QMean score : 0.320
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