Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAKNGA-VPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR
3O48 Chain:A ((61-115))
-----------------------------------------------GVKILTDIYKE-----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQK
General information:
TITO was launched using:
RESULT:
Template:
3O48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -662 for 328 contacts (-2.0/contact) +
2D Compatibility (PS) -5861 + (NN) -3023 + (LL) 3760
1D Compatibility (HY) -800 + (ID) 250
Total energy: -6836.0 ( -20.84 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_3O48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O48-query.scw
PDB file :
Tito_Scwrl_3O48.pdb
: