Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPNSVSYYRSASYSHVGMVRKVNEDASLDAPEAGLWVVADGMGGHAAGDFVSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLR-GVSVMGSTLVLLAARGNQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEARHHPRANVVTRAVGVHEQLELSEAALHVLPGDSFLLCSDGLNKTADDSELRDVLSHSDPYAVVRSLVHLGLTRGAPDNITALVVRAF
1TXO Chain:A ((3-235))
------LVLRYAARSDRGLVRANNEDSVYAG--ARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAHSHPQRSLIMRALTGHE-VEPTLTMREARAGDRYLLCSDGLSDPVSDETILEALQIPEVAESAHRLIELALRGGGPDNVTVVVADLE
General information:
TITO was launched using:
RESULT:
Template:
1TXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161779 for 2041 contacts (-79.3/contact) +
2D Compatibility (PS) -24163 + (NN) -7031 + (LL) 428
1D Compatibility (HY) -12000 + (ID) 3900
Total energy: -208445.0 ( -102.13 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_1TXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TXO-query.scw
PDB file :
Tito_Scwrl_1TXO.pdb
: