Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWNNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWGFSELKLDDALLTQGKLAIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPLKRVGTRDTVEEGEALGGARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTERDGLGEYAAVGVARVREKRADQALSLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALAGRVVASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTFTASQRRPEEYPVYNHDDLAASFAPVMLALRQALATVIDAKAIAIP-IVE--------------------------KAYGVHVAMLSDRSLIDNASFVLVVRADVPGESLRGHFPQQAKVGSVEHIRDLVNLQLPGIGLLPMPVAPRQIPYHAGSTYFELDRGSAHWKQLTHSGGFAFHIAGQFPGLNLAFWAIRG |
| 4WMY Chain:A ((24-306)) | ------------------------------------------------------------------------CSSSPSLPRSCKEIKDECPSAFDGLYFLRTENGV--IYQTFCDMTSGGGG--WTLVASVHENDMRGKCTVGDRWSSQQGSKAVYPEGDGNWAN----YNTFGSAEAATS--DDYKNPGYYDIQAKDLGIWHVPNKSPMQHWRNS--SLLRYRTDTGFLQTLGHNLFGIYQKYPVKYGEGKCWTDNGPVIPV---------VYDFGDAQKTASYYSPYGQREFTAGFVQFRVFNNERAANALCAGMRVTGCNTEHHCIGGGGYFPEASPQQCGDFSGFDWSGYGTHVGYSSSREITE-AAVLLFYR---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28790 for 2125 contacts (-13.5/contact) +
2D Compatibility (PS) -25466 + (NN) 9424 + (LL) 11204
1D Compatibility (HY) 400 + (ID) 2200
Total energy: -35428.0 ( -16.67 by residue)
QMean score : 0.156
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