Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
M------AELTLQERLQPSLLDRLTDDEPGNLKEAAERRVLTLNQLKASVLRDLAWLFNTTSLFDHGPAARMPAGNSVLNYGLP-ALAGHTASSVDVHAIEALLTETIATFEPRIIRSSLRVRAQLLPGEMDHNAL-SFEIEGDLWAEPAPLRLLLTTNLDLETGHVRVAQGERRRT
2CWO Chain:A ((1-177))
MKFFLKDGETSRALSRSESLLRRVKELGTNSQQSEISECVDEFNELAS--FNHLLVTVEHREWMEQRIGEMLKEIRAFLKVRVVTPMHKETASDTLNAFLEEYCRITGLAREDALREKMRKVKSVVL---FHHSELLKFEVTENMF----SYTELLKLNLSLRVISSQILGMAI---
General information:
TITO was launched using:
RESULT:
Template:
2CWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31100 for 1072 contacts (-29.0/contact) +
2D Compatibility (PS) -16968 + (NN) -5673 + (LL) 460
1D Compatibility (HY) -9600 + (ID) 1400
Total energy: -64281.0 ( -59.96 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_2CWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CWO-query.scw
PDB file :
Tito_Scwrl_2CWO.pdb
: