Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTALPARLDG-VVIGVLLDVPDA-AAPVVAYPGCPSEHGLAAATTTQLSRA-------DIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN
3QR8 Chain:A ((11-91))
--------------ARALRNMIRTGIIVETDLNAGRCRVQTGG---MCTDWLQWLTHRAGRSRTWWAPSVGEQVLILAVGGELDTAFVLPGIYSGDNPSPSVSADALHIRFPDGAVIEYEPETSALTVSGIKTASVTASGSVTATVPVVMVKASTRVT
General information:
TITO was launched using:
RESULT:
Template:
3QR8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38847 for 414 contacts (-93.8/contact) +
2D Compatibility (PS) -7836 + (NN) -3426 + (LL) 1044
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -52015.0 ( -125.64 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_3QR8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QR8-query.scw
PDB file :
Tito_Scwrl_3QR8.pdb
: